Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq104137 95.1 4e-17 >seq104137 Length=3259 Score = 95.1 bits (104), Expect = 4e-17 Identities = 105/139 (76%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 11 ACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATG 70 ||||||| | ||||||| | | || ||||| ||| |||| ||||| || ||| Sbjct 16 ACAGGGCAATTGTCGCTGCATATGGAGCCGAAGCCA-----TCTATCCATGACCCTGATA 70 Query 71 AAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGA 130 ||| | ||||| || |||||||||||||| ||| |||||||||||| || ||||| Sbjct 71 AAGCTTGGGTAA-ACTAAGTGGAGGTCCGAACCTACTGATGTTGAAAAATCAGCAGATGA 129 Query 131 GCTGTGGGTAGGGGTGAAA 149 | ||||| ||||||||||| Sbjct 130 GTTGTGGTTAGGGGTGAAA 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1687810477056