Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq103020 84.2 2e-11 >seq103020 Length=5539 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||||| ||||| || || |||||||||||| || |||| | || ||||||||||| Sbjct 4361 CGCTTGCCTCCACCCTGATCAACGTAGCGAGCGGTATCGTTGTACACTCGCAACATCGGA 4420 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATC 66597 || | |||||| || | ||||| || || ||| | | | ||||| |||||||| | Sbjct 4421 ACTATCCCGTTTGAAGTACCATTTGTACC-ACGAATGTAGCTGCTCGTCGCCCGTATGTT 4479 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||| | || ||||||||||| || | || ||| | ||||| || || || Sbjct 4480 GTGGATCGACAAGCCAATACCACCAGCGGATTTGCTGATCACCGCACACTCCTTCAACGT 4539 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 | | ||||| ||||| |||| |||| || Sbjct 4540 ATCGTAGATGCCTTCAATACTGTCATCCTTCAT 4572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054808540960