Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq758 98.7 2e-18 >seq758 Length=186484 Score = 98.7 bits (108), Expect = 2e-18 Identities = 221/325 (68%), Gaps = 9/325 (3%) Strand=Plus/Plus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GAT-TC 69 ||| |||||||||| | |||| ||| || | ||| || |||| | | ||| || Sbjct 2484 GGGAGTGAAATAGAACATGAAACCGTAAGCTCCCGAGCAGTGGGAGGATAATTGGATATC 2543 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| ||| | | | | || ||||||| Sbjct 2544 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTA-TAGGCGGCGGCCTGGTTAAG 2600 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| ||||| || ||||||||| ||| ||||| | || | || Sbjct 2601 GAAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCCCAGGGGCAACTGTCGCTGCTT 2657 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| || |||||||| ||| || |||| ||||| | | | | | || Sbjct 2658 ATGGACCCGAACCCGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAGGTG 2717 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||||| | ||||||| ||| || ||||||||||| | Sbjct 2718 GAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTCGTGGTTAGGGGTGAAATG 2777 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 ||| || ||| ||| ||||| || Sbjct 2778 CCACTCGAACCCGGAGCTAGCTGGT 2802 Score = 98.7 bits (108), Expect = 2e-18 Identities = 221/325 (68%), Gaps = 9/325 (3%) Strand=Plus/Minus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GAT-TC 69 ||| |||||||||| | |||| ||| || | ||| || |||| | | ||| || Sbjct 53924 GGGAGTGAAATAGAACATGAAACCGTAAGCTCCCGAGCAGTGGGAGGATAATTGGATATC 53865 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| ||| | | | | || ||||||| Sbjct 53864 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTA-TAGGCGGCGGCCTGGTTAAG 53808 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| ||||| || ||||||||| ||| ||||| | || | || Sbjct 53807 GAAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCCCAGGGGCAACTGTCGCTGCTT 53751 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| || |||||||| ||| || |||| ||||| | | | | | || Sbjct 53750 ATGGACCCGAACCCGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAGGTG 53691 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||||| | ||||||| ||| || ||||||||||| | Sbjct 53690 GAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTCGTGGTTAGGGGTGAAATG 53631 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 ||| || ||| ||| ||||| || Sbjct 53630 CCACTCGAACCCGGAGCTAGCTGGT 53606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972792626176