Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq758 230 6e-58 >seq758 Length=186484 Score = 230 bits (254), Expect = 6e-58 Identities = 254/336 (76%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 56781 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 56722 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||||||||||||| | ||| || | |||| | | || Sbjct 56721 AAGCGTTATCCGGAATGATCGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTCCGCCGT 56662 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAG 181 ||||||| ||||| |||| ||| || | | ||| | ||| || |||| | || Sbjct 56661 CAAATCCCAGGGCTCAACCCTGGACGGGCGGTGGAAACTAC-CGAGCTGGAGTACGGTAG 56603 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || || |||||| | ||| ||| |||||||||||||| || | ||||||||||||| Sbjct 56602 GGGCAGGGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAGGAACACCAATG 56543 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||||||| | | ||| |||||||| || | |||||||| ||||||| || Sbjct 56542 GCGAAGGCACTCTGCCGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATG 56483 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||| ||||||| ||| |||||||| Sbjct 56482 GGATTAGATACCCCAGTAGTCCCAGCCGTAAACGAT 56447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289590224832