Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq758 87.8 2e-15 >seq758 Length=186484 Score = 87.8 bits (96), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 3640 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 3698 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| | |||||||||| || ||| ||| | | | | ||||| Sbjct 3699 GAACTCGGCAAAATAGCCCCGCAACTTCGGGAGAAGGGGCGCCTTCTCGCAGA--GGAGG 3756 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 3757 TCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 3802 Score = 87.8 bits (96), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 52768 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 52710 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| | |||||||||| || ||| ||| | | | | ||||| Sbjct 52709 GAACTCGGCAAAATAGCCCCGCAACTTCGGGAGAAGGGGCGCCTTCTCGCAGA--GGAGG 52652 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 52651 TCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 52606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531196099332