Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq758 453 3e-125 >seq758 Length=186484 Score = 453 bits (502), Expect = 3e-125 Identities = 400/497 (80%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 56375 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 56316 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||||||||||||||||| |||||||| | ||| | || Sbjct 56315 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGGCTTGACATGCCGTGAATCTTC 56256 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | |||| ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 56255 TTGAGAGAGAGGAGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 56198 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| |||||| ||||||||| ||||||||||||||||||||||| | ||||||| Sbjct 56197 CTCGTGCCGTGAGGTGTTGGGTTGAGTCCCGCAACGAGCGCAACCCTCGTGTCTAGTTGC 56138 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||| | || | || || |||| ||||||||| || | |||||||| |||| ||| Sbjct 56137 CATCACTGAGCTTGGAACCCTAAACAGACTGCCGGCGAAGAGCCGGAGGAGGGTGAGGAT 56078 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||| ||||||||| | | ||||| |||||||||||||||||| | || Sbjct 56077 GACGTCAAGTCAGCATGCCCCTCACGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 56018 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| || | |||||||| || || || ||| ||| | |||||||||||||| Sbjct 56017 AAAGGGTCGCAACCCCGCGAGGGCAGGCCAACCCCGAAAACCCGGCCTCAGTTCGGATTG 55958 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 55957 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 55898 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 55897 CGGTGAATCCGTTCCCG 55881 Score = 376 bits (416), Expect = 7e-102 Identities = 383/497 (77%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct 33 TACGCTCGCAAGAATGAGACTCAAAGGAAGTGACGGGGCACCGCACAACCGGTGGAGCAT 92 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||| |||||||| ||||||||||||||||||||| | |||| | ||| || Sbjct 93 CTGGCCTAATTCGAGGCAACGCGAAGAACCTTACCAGGGCGAGACAGGCCGTGAATAGTC 152 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | |||| ||||| | |||| ||| || | |||| || |||||| ||||||||| Sbjct 153 TTGAGAGAGAGGAGTGCCCTC--GGGAACGCGGACACAGTTGGTGCATGACTGTCGTCAG 210 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||| ||||||||| ||||| ||||||||||||||||||||||| | |||| || Sbjct 211 CTCGTACCGTGAGATGCTGGGTCGAGTCCCGCAACGAGCGCAACCCTAGTGTATAGTCGC 270 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||| | || | || || |||| ||| ||||| || | |||||||| |||| ||| Sbjct 271 CATCACTGAGCTTGGAACCCTAAACAGACGGCCGGCGAAGAGCCGGAGGAGGGTGAGGAT 330 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||| ||||||||| | | ||||| ||||||||||||||||| | || Sbjct 331 GACGTCAAGTCAGCATGCCCCTCACGCCATGGGCGACACACGTGCTACAATGCCCGGGAC 390 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| || | |||||||| || || || ||| ||| | |||||||||||||| Sbjct 391 AAAGGGTCGCAACCCCGCGAGGGCAGGCCAACCCCGAAAACCCGGCCTCAGTTCGGATTG 450 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | | Sbjct 451 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGA 510 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 511 CGGTGAATCCGTTCCCG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503988599680