Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq758 197 3e-48 >seq758 Length=186484 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| ||||||||||| ||||||||||| Sbjct 4235 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAGGGTAACGGAGGC 4294 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 || ||||| | ||||| | |||| ||||| || | ||||||||||| ||||| | Sbjct 4295 GCGCAAAGGTTCCCTCGGGCTGGACGGAAATCAGCCTTCAAGTGCAAAGGCGGAAGGGAG 4354 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 | |||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||| Sbjct 4355 CTCGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 4414 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 4415 GCCGGGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 4463 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| ||||||||||| ||||||||||| Sbjct 52174 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAGGGTAACGGAGGC 52115 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 || ||||| | ||||| | |||| ||||| || | ||||||||||| ||||| | Sbjct 52114 GCGCAAAGGTTCCCTCGGGCTGGACGGAAATCAGCCTTCAAGTGCAAAGGCGGAAGGGAG 52055 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 | |||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||| Sbjct 52054 CTCGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 51995 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 51994 GCCGGGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 51946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982392553408