Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq758 113 5e-23 >seq758 Length=186484 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 4075 GGGTCTTTCTGTCCGGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 4016 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 4015 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 3957 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 3956 ACAAGGAATTTCGCTACCTTAGGACCGTTA 3927 Score = 100 bits (110), Expect = 3e-19 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 52334 GGGTCTTTCTGTCCGGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 52393 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 52394 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 52452 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||| |||||||||| |||||||||||| Sbjct 52453 ACAAGG-ATTTCGCTACATTAGGACCGTTA 52481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547195981842