Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq758 241 3e-61 >seq758 Length=186484 Score = 241 bits (266), Expect = 3e-61 Identities = 260/336 (77%), Gaps = 19/336 (6%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||| | ||||||| | | |||||||||||| || ||||||||||||||| Sbjct 56812 TTTACGACCCGTGGGCCTTCTTCCCC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 56869 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || ||||||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct 56870 TTGCGGAAAATTCCCCACTGCT-CCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 56928 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||| | |||||| ||| ||||||||||| |||||||||||||| ||| Sbjct 56929 GTGGCTGATCATCCTCCCGGACCAGCTACTGATCGTCGCCTCGGTGAGCCATTACCCCAC 56988 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||| ||||||| ||| | || | || | || | || | ||| | | Sbjct 56989 CAACTGGCTAATCAGACGCAAGCCCCTC--------CTTGGGCGGATTTCCTCCTTC-TG 57039 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA-- 299 || || || | |||| ||||||| | |||||||| |||| |||||||| ||| Sbjct 57040 CT-CCTCAG--CCTATGGGGTATTACCAGCCGTTTCCAGCCGTTGTCCCCCAC--CCAAG 57094 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| |||||| || || |||||||||||||| || Sbjct 57095 GGCAGGTTCCTACGCGTTGCTCACCCGTCCGCCACT 57130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071991874240