Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010-
07-06] 758 sequences; 212,501,708 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq758 188 2e-45
>seq758
Length=186484
Score = 188 bits (208), Expect = 2e-45
Identities = 298/419 (71%), Gaps = 30/419 (7%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | |
Sbjct 3391 CGACTACGCCTATCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 3332
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||||| | |||| | | |||||| |||| | || |||||| |||
Sbjct 3331 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 3272
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACT--GAC 175
||||||| || ||| || | |||| || | | | ||||| | | ||
Sbjct 3271 ACATTCTCGCTTCCGCTTCGTCCGCACCTGC---TCGCGCTGGTGCTTCCTCCTTCCGAG 3215
Query 176 ACG-----ACGCTCCCCTACCCAA--------CCACACAGGTTGCCACAGCTTCGGCGGA 222
|| ||||||||||||| | | ||| | ||||||||||||| ||
Sbjct 3214 GCGGCGGAACGCTCCCCTACCGATGTGTTTTTCGACA-----TCCCACAGCTTCGGCAGA 3160
Query 223 TAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCAC 282
|||| | |||| | ||| ||||||| | | | ||||| ||||||||||||||||||
Sbjct 3159 CCGCTTA-GTCCCGTT-CATCCTCGGCGCAGGAGCGCTTGATCAGTGAGCTATTACGCAC 3102
Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCC-ACATCC 341
|||||||||| |||||||||| || ||||||| || ||||| ||| |||| || |||
Sbjct 3101 TCTTTCAAGGGTGGCTGCTTCTGGGCAAACCTCCCGGCTGTCTTTGCA-CTCCTACCTCC 3043
Query 342 TTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
||| |||||||| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 3042 TTTACCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 2984
Score = 188 bits (208), Expect = 2e-45
Identities = 298/419 (71%), Gaps = 30/419 (7%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | |
Sbjct 53017 CGACTACGCCTATCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 53076
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||||| | |||| | | |||||| |||| | || |||||| |||
Sbjct 53077 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 53136
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACT--GAC 175
||||||| || ||| || | |||| || | | | ||||| | | ||
Sbjct 53137 ACATTCTCGCTTCCGCTTCGTCCGCACCTGC---TCGCGCTGGTGCTTCCTCCTTCCGAG 53193
Query 176 ACG-----ACGCTCCCCTACCCAA--------CCACACAGGTTGCCACAGCTTCGGCGGA 222
|| ||||||||||||| | | ||| | ||||||||||||| ||
Sbjct 53194 GCGGCGGAACGCTCCCCTACCGATGTGTTTTTCGACA-----TCCCACAGCTTCGGCAGA 53248
Query 223 TAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCAC 282
|||| | |||| | ||| ||||||| | | | ||||| ||||||||||||||||||
Sbjct 53249 CCGCTTA-GTCCCGTT-CATCCTCGGCGCAGGAGCGCTTGATCAGTGAGCTATTACGCAC 53306
Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCC-ACATCC 341
|||||||||| |||||||||| || ||||||| || ||||| || ||||| || |||
Sbjct 53307 TCTTTCAAGGGTGGCTGCTTCTGGGCAAACCTCCCGGCTGTCTTTGC-ACTCCTACCTCC 53365
Query 342 TTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
||| |||||||| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 53366 TTTACCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 53424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177591073792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |