Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq758 86.0 5e-15 >seq758 Length=186484 Score = 86.0 bits (94), Expect = 5e-15 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| || || ||||||||| Sbjct 55944 CGAGTTGCAGCCTGCAATCCGAACTGAGGCCGGGTTTTCGGGGTTGGCCTGCCCTCGCGG 56003 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| | | |||| ||| Sbjct 56004 GGTTGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCGTGAGGGGCAT 56063 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGG 153 | ||||||||||||||| |||| |||||||| Sbjct 56064 GCTGACTTGACGTCATCCTCACCCTCCTCCGG 56095 Score = 80.6 bits (88), Expect = 2e-13 Identities = 109/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| || || ||||||||| Sbjct 464 CGAGTTGCAGCCTGCAATCCGAACTGAGGCCGGGTTTTCGGGGTTGGCCTGCCCTCGCGG 405 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| ||||||| ||||||| |||| | | |||| ||| Sbjct 404 GGTTGCGACCCTTTGTCCCGGGCATTGTAGCACGTGTGTCGCCCATGGCGTGAGGGGCAT 345 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGG 153 | ||||||||||||||| |||| |||||||| Sbjct 344 GCTGACTTGACGTCATCCTCACCCTCCTCCGG 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415996945260