Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq758 246 5e-63 >seq758 Length=186484 Score = 246 bits (272), Expect = 5e-63 Identities = 220/273 (81%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || ||||||| |||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 4785 GGTGGGCTTCCTGCTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 4726 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||| | ||||||| |||| ||||| |||| |||||||||||||||||| Sbjct 4725 TGTACCGCGGGCACGATAACTGGTACACCGGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 4666 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | || || |||| |||| ||| |||||| | |||||| ||||||||||||||| || Sbjct 4665 AGGGGAAGGTCCTATCAATGCTCCAACGCCCGCACCGGATATGGACCGAACTGTCTC-CG 4607 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || |||| |||||||||||||||||||||||| || | Sbjct 4606 ACGTTCTGAACCCAGCTCACGTACCGCTTTGATGGGCGAACAGCCCAACCCTTGGAACGT 4547 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| | |||||||| | || |||||||||||| Sbjct 4546 ACTACCGCCCCAGGTGGCGAAGAGCCGACATCG 4514 Score = 246 bits (272), Expect = 5e-63 Identities = 220/273 (81%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || ||||||| |||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 51624 GGTGGGCTTCCTGCTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 51683 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||| | ||||||| |||| ||||| |||| |||||||||||||||||| Sbjct 51684 TGTACCGCGGGCACGATAACTGGTACACCGGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 51743 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | || || |||| |||| ||| |||||| | |||||| ||||||||||||||| || Sbjct 51744 AGGGGAAGGTCCTATCAATGCTCCAACGCCCGCACCGGATATGGACCGAACTGTCTC-CG 51802 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || |||| |||||||||||||||||||||||| || | Sbjct 51803 ACGTTCTGAACCCAGCTCACGTACCGCTTTGATGGGCGAACAGCCCAACCCTTGGAACGT 51862 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| | |||||||| | || |||||||||||| Sbjct 51863 ACTACCGCCCCAGGTGGCGAAGAGCCGACATCG 51895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780794266488