Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq758 333 8e-89 >seq758 Length=186484 Score = 333 bits (368), Expect = 8e-89 Identities = 281/342 (82%), Gaps = 4/342 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||| | | Sbjct 57007 GCGTCTGATTAGCCAGTTGGTGGGGTAATGGCTCACCGAGGCGACGATCAGTAGCTGGTC 56948 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 | |||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||| ||| Sbjct 56947 CGGGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGG-AGC 56889 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || ||| Sbjct 56888 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGGGGAAGAA 56829 Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398 |||| ||||||||||| | || | ||| ||||| |||||||||| |||||| | Sbjct 56828 GGCCCACGGGTCGTAAACCCCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAATA 56769 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 ||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||| Sbjct 56768 AGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGG 56709 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| || |||||||| | |||||||| Sbjct 56708 AATGA-TCGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTC 56668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497588648192