Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq758 291 2e-76 >seq758 Length=186484 Score = 291 bits (322), Expect = 2e-76 Identities = 309/405 (76%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 56777 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 56718 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | |||||||||| || |||||||| | |||||||| | || ||| Sbjct 56717 GTTATCCGGAATGATCGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTCCGCCGTCAAA 56658 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | | ||| |||| | | ||||||| Sbjct 56657 TCCCAGGGCTCAACCCTGGACGGGCGGTGGAAACTACCGAGCTGGAGTACGGTAGGGGCA 56598 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 | |||||| | ||| |||||||||||||||||| || | |||||||||| ||||||| Sbjct 56597 GGGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAGGAACACCAATGGCGAA 56538 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 ||| ||| || | | |||||||||||| ||||||| ||||||| || ||||| Sbjct 56537 GGCACTCTGCCGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 56478 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGC 364 |||||||| ||||||| ||||||||||||| | |||| | | | | ||| || | Sbjct 56477 AGATACCCCAGTAGTCCCAGCCGTAAACGATGGAGACTAAGCG-CTGCGCGTATCGACCC 56419 Query 365 TC-CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| ||||| ||||| ||||||| || ||||||||||| Sbjct 56418 GCGCAGTGCTGCAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 56374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203190879744