Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq758 190 7e-46 >seq758 Length=186484 Score = 190 bits (210), Expect = 7e-46 Identities = 378/550 (69%), Gaps = 40/550 (7%) Strand=Plus/Plus Query 14 GGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG 73 |||| || ||||||| | | |||||||| || |||||||| ||||| ||||||||||| Sbjct 2640 GGGCAACTGTCGCTGCTTATGGACCCGAACCCGGGTGATCTATCCATGACCAGGATGAAG 2699 Query 74 GTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCT 133 | | | | || |||||||||||||| ||| |||||||||||| || ||||||| Sbjct 2700 CTTGGATGAAACTAGGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTC 2759 Query 134 GTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATT 193 |||| ||||||||||| || | | ||| ||| |||||||||||| |||||| || Sbjct 2760 GTGGTTAGGGGTGAAATGCCACTCGAACCCGGAGCTAGCTGGTTCTCCCCGAAATGCGTT 2819 Query 194 TAG--GTAGTGCCT--CAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGT 249 || | || | | | || | ||| ||||||| |||||||||| || | ||| | Sbjct 2820 GAGGCGCAGCGGTTGACTAGGCT-ACC--TGGGGGTAAAGCACTGTTACGG-TGCGGGCT 2875 Query 250 CATTGCGACTTACCAAACCATTGCAAACTCCGAATGC---GCAT-----CAGTTTTAC-C 300 | | ||||||||| |||||||| |||| | | || | | | || | Sbjct 2876 GCGAGAGCGGTACCAAACCGGGGCAAACTCTGAATACTAGGTATGACCCCCGAGTAACAC 2935 Query 301 GCGGG-------------AGTGAGGGCATGGGTGCTAAGGT---CCGTGCCCGAGAGGAG 344 | ||| |||||| |||| | |||| | |||| ||||||| Sbjct 2936 GGGGGCTGAGGGTCAGCCAGTGAGACGGTGGGGGATAAGCTTCACCGT---CGAGAGGGA 2992 Query 345 AAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCT 404 || | ||||| | ||||||||||||| ||||||| ||| ||| | || || || Sbjct 2993 AACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGGTA--AAGGAGGTAG 3050 Query 405 GATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAA 464 || ||| |||||||| ||| ||| || |||||||||| | || ||||||||||||| Sbjct 3051 GAGTGCAAAGACAGCCGGGAGGTTTGCCCAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAA 3109 Query 465 CAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAA 524 |||||||| || || || ||| || || | |||| | |||| |||| ||||| Sbjct 3110 TAGCTCACTGATCAAGCGCTCCTGCGCCGAGGATGAACGGG-ACTAAGCGGTCTGCCGAA 3168 Query 525 GCAGTGGGAT 534 || ||||||| Sbjct 3169 GCTGTGGGAT 3178 Score = 190 bits (210), Expect = 7e-46 Identities = 378/550 (69%), Gaps = 40/550 (7%) Strand=Plus/Minus Query 14 GGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG 73 |||| || ||||||| | | |||||||| || |||||||| ||||| ||||||||||| Sbjct 53768 GGGCAACTGTCGCTGCTTATGGACCCGAACCCGGGTGATCTATCCATGACCAGGATGAAG 53709 Query 74 GTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCT 133 | | | | || |||||||||||||| ||| |||||||||||| || ||||||| Sbjct 53708 CTTGGATGAAACTAGGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTC 53649 Query 134 GTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATT 193 |||| ||||||||||| || | | ||| ||| |||||||||||| |||||| || Sbjct 53648 GTGGTTAGGGGTGAAATGCCACTCGAACCCGGAGCTAGCTGGTTCTCCCCGAAATGCGTT 53589 Query 194 TAG--GTAGTGCCT--CAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGT 249 || | || | | | || | ||| ||||||| |||||||||| || | ||| | Sbjct 53588 GAGGCGCAGCGGTTGACTAGGCT-ACC--TGGGGGTAAAGCACTGTTACGG-TGCGGGCT 53533 Query 250 CATTGCGACTTACCAAACCATTGCAAACTCCGAATGC---GCAT-----CAGTTTTAC-C 300 | | ||||||||| |||||||| |||| | | || | | | || | Sbjct 53532 GCGAGAGCGGTACCAAACCGGGGCAAACTCTGAATACTAGGTATGACCCCCGAGTAACAC 53473 Query 301 GCGGG-------------AGTGAGGGCATGGGTGCTAAGGT---CCGTGCCCGAGAGGAG 344 | ||| |||||| |||| | |||| | |||| ||||||| Sbjct 53472 GGGGGCTGAGGGTCAGCCAGTGAGACGGTGGGGGATAAGCTTCACCGT---CGAGAGGGA 53416 Query 345 AAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCT 404 || | ||||| | ||||||||||||| ||||||| ||| ||| | || || || Sbjct 53415 AACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGGTA--AAGGAGGTAG 53358 Query 405 GATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAA 464 || ||| |||||||| ||| ||| || |||||||||| | || ||||||||||||| Sbjct 53357 GAGTGCAAAGACAGCCGGGAGGTTTGCCCAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAA 53299 Query 465 CAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAA 524 |||||||| || || || ||| || || | |||| | |||| |||| ||||| Sbjct 53298 TAGCTCACTGATCAAGCGCTCCTGCGCCGAGGATGAACGGG-ACTAAGCGGTCTGCCGAA 53240 Query 525 GCAGTGGGAT 534 || ||||||| Sbjct 53239 GCTGTGGGAT 53230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689587192832