Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq758 134 3e-29 >seq758 Length=186484 Score = 134 bits (148), Expect = 3e-29 Identities = 207/295 (70%), Gaps = 19/295 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 56741 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 56789 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | ||||| |||||| | |||| | ||||| ||| ||||| Sbjct 56790 GC------TTCTTCTCCGAGAAAAGGGGTTTACGACCCGTGGG-CCTTCTTCCCCCACGC 56842 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| ||||||| |||||||||| Sbjct 56843 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCT-CCTCCCGTAG 56901 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||| | || | ||| || Sbjct 56902 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCCCGGACCAGCTACTGAT 56961 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||| | || |||| ||| ||||||| || ||| ||||| ||||| ||| || Sbjct 56962 CGTCGCCTCGGTGAGCCATTACCCCACCAACTGGCTAATCAGACGCAAGCCCCTC 57016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068791898496