Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq187 84.2 3e-11 >seq187 Length=294 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 19523 TTTTTA-TTCCTCTATAGCTCAATCGGCAGAGCATCTGACTGTTAATCAGAGGGTTCCTG 19581 |||||| |||||| |||||||| |||| |||||| ||||||||||||| |||| ||| Sbjct 139 TTTTTAGTTCCTCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCACTG 80 Query 19582 GTTCGAGTCCAGGTGGAGGAG 19602 |||||| ||||| | |||||| Sbjct 79 GTTCGAATCCAGTTCGAGGAG 59 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/92 (82%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 165730 CAATGGAAGAGTGGCAGAGTGGTTGATTGCATCAGTCTTGAAAACTGACGT--GTTAGTA 165787 ||| ||| | ||||||||| |||| | |||| ||||||||||||||| ||| ||| || Sbjct 274 CAACGGAGGGGTGGCAGAGCGGTTTAATGCACCAGTCTTGAAAACTGGCGTAGGTTTATA 215 Query 165788 GC--ACCGTGAGTTCGAATCTCACCTCTTCCG 165817 || |||| ||||||||||||| |||| |||| Sbjct 214 GCCTACCGAGAGTTCGAATCTCTCCTCCTCCG 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634054391094000