Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_031917.1 Length=39949 Score E Sequences producing significant alignments: (Bits) Value seq158 91.5 4e-14 >seq158 Length=263 Score = 91.5 bits (100), Expect = 4e-14 Identities = 145/207 (70%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 6359 CAGGGTGCTGGTAAGTTTGGCGACCGTCAATCTGCTATCGTTGCTTGGGTTATGCACTCT 6418 || || || ||| |||||| || || || | || | | |||||||| ||||||||| Sbjct 57 CAAGGCGCAGGTTTGTTTGGTGATCGCCAGGCATCTTTGGCAGCTTGGGTAATGCACTCT 116 Query 6419 AAGTCGCAAACTGACATTTGGGGTAACGCTGTTGGTAACTCTAACGACCTGTTTGATTTT 6478 ||||| ||||| || | | || ||| |||||||||| ||| || | | || Sbjct 117 AAGTCTGTTACTGATATCTACGCAGGTTCTCTTGCTAACTCTAACCGCCTATTCGTTATT 176 Query 6479 GGTACTATCCGTGTAGTTTCTGATGGTCACGGTCGCCCGTTGATTATGACTGACTCAG-A 6537 | || | | ||||| |||||| ||||| ||| | || |||||||| ||| | Sbjct 177 GATAACGTTCAAGTAGTAGATGATGGATTTGGTCGTCCGATTATCATGACTGATTCACCA 236 Query 6538 CGCGCTACACTTTGATAATGCTGGTAC 6564 ||| |||||||||||||||| |||||| Sbjct 237 CGCCCTACACTTTGATAATGGTGGTAC 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127710299807242