Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq251 87.8 2e-12 >seq251 Length=241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 24022 AGACATCAA-ATTGGTGTTATCGCTCAAGAGGTTGAAAAAGTTATTCCTTCTGTTGTTTC 24080 ||| | ||| || |||||||| |||||||||||| | ||||| | || |||||| Sbjct 194 AGAGACCAAGATGGGTGTTATTGCTCAAGAGGTTTTAGAAGTTGTACCAGAGGTTGTTCA 135 Query 24081 TGAACGTGATGATAATGGTACAAAGACAGTCGCTTATGGTAACATGGTCGGTCTTTTAAT 24140 | || || ||| |||||| | | || || ||||| |||||| ||| |||||||| Sbjct 134 TAAA---GACGATGATGGTATGTATGCTGTAGCGTATGGAAACATGAACGGGCTTTTAAT 78 Query 24141 TGAAGCTATTAAAGAA 24156 |||||||||||||||| Sbjct 77 TGAAGCTATTAAAGAA 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559305410140400