Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq926 82.4 7e-14 seq137 82.4 7e-14 >seq926 Length=180086 Score = 82.4 bits (90), Expect = 7e-14 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| ||| || || || ||| | |||| ||| ||| Sbjct 25215 GCGACTGTTTATCAAAAACACAGGTCTCCGCTAAGTCGCAAGACAATGTATGGGGGCTGA 25156 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| ||||||||||||||| Sbjct 25155 CGCCTGCCCAGTGCCGGAAGGTTAA 25131 >seq137 Length=19730 Score = 82.4 bits (90), Expect = 7e-14 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| ||| || || || ||| | |||| ||| ||| Sbjct 9385 GCGACTGTTTATCAAAAACACAGGTCTCCGCTAAGTCGCAAGACAATGTATGGGGGCTGA 9444 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| ||||||||||||||| Sbjct 9445 CGCCTGCCCAGTGCCGGAAGGTTAA 9469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476795722806