Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq926 192 1e-46 seq137 192 1e-46 >seq926 Length=180086 Score = 192 bits (212), Expect = 1e-46 Identities = 171/214 (80%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| | ||| Sbjct 24745 GGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCGTGCAAAGGTTTCCT 24686 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| ||| ||||| || | ||| ||||||| |||| | |||||||| | ||| Sbjct 24685 CAGACTGGTCGGAAATCAGTCTTCGAGTATAAAGGCATAAGGAAGCTTGACTGCAAGACC 24626 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| ||||| |||||||||||| |||| ||||||| | || |||| ||||| | | Sbjct 24625 TACAAGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTACTGAGTGGAAAGAC 24566 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||||| ||||||||||| ||| || |||||| Sbjct 24565 TGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 24532 >seq137 Length=19730 Score = 192 bits (212), Expect = 1e-46 Identities = 171/214 (80%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| | ||| Sbjct 9855 GGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCGTGCAAAGGTTTCCT 9914 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| ||| ||||| || | ||| ||||||| |||| | |||||||| | ||| Sbjct 9915 CAGACTGGTCGGAAATCAGTCTTCGAGTATAAAGGCATAAGGAAGCTTGACTGCAAGACC 9974 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| ||||| |||||||||||| |||| ||||||| | || |||| ||||| | | Sbjct 9975 TACAAGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTACTGAGTGGAAAGAC 10034 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||||| ||||||||||| ||| || |||||| Sbjct 10035 TGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 10068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982390902976