Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq758 113 5e-23 seq271 91.5 2e-16 >seq758 Length=101539 Score = 113 bits (124), Expect = 5e-23 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||| ||| | || |||||||||||||||||||||||||||||||| ||| Sbjct 7055 AAACCAACAAAACAGGAAA-CAGGTCCTATTCTATTATTCCATGCTAATGTATTCATGGC 7113 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| ||| ||||| Sbjct 7114 AAACGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAA 7152 >seq271 Length=8214 Score = 91.5 bits (100), Expect = 2e-16 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 || |||||||||||| || | ||||||||| |||||||||||| | ||||| |||| Sbjct 6467 AAGCCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCAACGTTATTCAGGCG 6525 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| |||||| |||||||| |||||||| |||| ||||| Sbjct 6526 TAACCGGCCTGCCTTGAACACACTAATTTTTTCAAAGTAAA 6566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595194660684