Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chondrus_20crispus_20[genbank_20GCA_5F000350225.2_202013-05-22] 926 sequences; 104,980,420 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq217 100 6e-19 >seq217 Length=342381 Score = 100 bits (110), Expect = 6e-19 Identities = 223/326 (68%), Gaps = 8/326 (2%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||||| ||| |||||||| ||| | || ||||| ||||| | || | Sbjct 323199 CGACCGCCTGCGCCACGTGAGCGAGCGCGCGGAGATCGGCGAAGGGCGCGAGGGCGTCTT 323140 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGC-CGTGGGCA 119 ||| |||||||| || ||||||||||| ||| ||| | | ||| | |||| Sbjct 323139 CGCAGTGACCATCCCGGAGAAGCCCGGGGCGTTCCGCGCGCTGATCTCGGCGCTCGGGCC 323080 Query 120 AGCGC-CAG-ATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTT 177 | || || |||||||| ||||||||||| | || | | | |||||||||| | || Sbjct 323079 CGAGCAGAGCATCACCGAGTTCAACTACCGGTACCGCAGCAACGCCGAGGCGCACGTGTT 323020 Query 178 TGTCGGCGTGCA-GACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGA 236 || || || | | | | || || || | |||| | | ||| | || || | Sbjct 323019 CGTGGGGATGAAGGTGGCGTCGCG-CAATGA-CGTCGCA--TCCATCATCACAAGGCTCA 322964 Query 237 CCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCC 296 |||| || | ||| | | ||||| || || | ||| |||||||||||||||| | Sbjct 322963 ACGAGAGGGCGATGACGGCGATCGACCTCACGGACGACGAGATGGCCAAGCTGCACATTC 322904 Query 297 GCCATATGGTCGGCGGCCATGCGGCG 322 | ||| | || ||||| |||| |||| Sbjct 322903 GGCATCTCGTGGGCGGGCATGTGGCG 322878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027190488128