Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2122 293 4e-77 >seq2122 Length=9419 Score = 293 bits (324), Expect = 4e-77 Identities = 204/228 (89%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || |||| ||| |||||| |||| ||||||| ||| | Sbjct 6139 GTACAAAGGGCAGGGACGTAATCGACGCACGCT-GATGACATGCGCCTACTAGGTATT-C 6082 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| || ||||||||| ||||||||||||||||||| || || ||||||| Sbjct 6081 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCAAGTTTAAAGATTT 6022 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||||||| |||| ||||||| ||||||||||| | |||||||||||||||||||||| Sbjct 6021 CCCGGACCTTTCGGTCAAGGTGG-AGACTCGTTGAGTGCATCAGTGTAGCGCGCGTGCGG 5963 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5962 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751975143580