Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2122 140 2e-31 >seq2122 Length=9419 Score = 140 bits (154), Expect = 2e-31 Identities = 102/117 (87%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| |||||||||| ||| ||||||| | | |||||| ||| Sbjct 5612 GAACCCAAAGACTTTAGTTTCCCGTAAGGTGCTGAGGGAGTCAATA-GTGAACATCCCCC 5554 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| Sbjct 5553 AATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGAGGGTATCTGATCCTCTTCGA 5497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278391094680