Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2122 187 5e-45 >seq2122 Length=9419 Score = 187 bits (206), Expect = 5e-45 Identities = 201/261 (77%), Gaps = 5/261 (2%) Strand=Plus/Plus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC--G 117 ||||| | | | |||||||||||||||| |||||||| |||||||| | |||| | Sbjct 5237 GGGAGACGGATCGTTTACTTTGAAAAAATCAGAGTGTTTCAAGCAGGCAGCTCGCTCTTG 5296 Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 || |||||||||| ||||| |||||||| | ||| |||||||||||||||| | | Sbjct 5297 CATGGATTAGCATGGGATAATGAAATAGGACTTT-GGTGCTATTTTGTTGGTTTCGAACA 5355 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 ||| ||||||||||||||||| |||| |||| |||||| | |||||||||| Sbjct 5356 CCGAAGTAATGATTAATAGGGACAGTCAGGGGCACTCGTATTCCGCCGAGAGAGGTGAAA 5415 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||| || |||||| ||| ||||||||||| || ||| ||||||||||| | | Sbjct 5416 TTCTCAGACCAGCGGAAGACGAACCACTGCGAAAGCATTTGCCAGGGATGTTTTCACTGA 5475 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| |||||||||||||||| Sbjct 5476 TCA-AGAACGAAAGTTAGGGG 5495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915168773376