Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2122 203 1e-49 >seq2122 Length=9419 Score = 203 bits (224), Expect = 1e-49 Identities = 222/298 (74%), Gaps = 18/298 (6%) Strand=Plus/Plus Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||| ||||| || | | || ||||||| | ||||||||||||||||||| |||| | Sbjct 7486 CTGACGTAACGGGCGCCACCGACCCGTCTAGAAACACGGACCAAGGAGTCTGACATGGAC 7545 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||| |||||||||||||| || ||| |||||||||||| || | Sbjct 7546 GCGAGTACTTGGGTGTCAAACCTATGTGCGCAATGAAAGTGAAGGGCG------------ 7593 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 ||| || | ||||| | |||| | | || || ||||||| |||| | ||| Sbjct 7594 -----TGCCCCGCCAACCGACCTTGATCTGCTGTGAAGGGTTTGAGTG-GAGCGTTCCTG 7647 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 | ||||||||||||||||||||||||||||| ||||| ||||| | | |||| | | | Sbjct 7648 TCGGGACCCGAAAGATGGTGAACTATGCCTGGATAGGTTGAAGTCTGCTGAAAGGCAGAT 7707 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| | ||| ||||||||||| ||||||||| ||||||||||||||| Sbjct 7708 GGAGGGCCGTAGCGATACTGACGTGCAAATCGTTCGTCAAATCTGGGTATAGGGGCGA 7765 Score = 159 bits (176), Expect = 1e-36 Identities = 121/143 (85%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| ||||||| |||||||||||||||| ||||||||||||||| Sbjct 7192 GAGTCGGGTTGCTTGGGATTGCAGCTTGAAATGGGAGGTAAATTCCTTCTAAAGCTAAAT 7251 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| ||||||||||||| ||||||| |||| |||||||| |||| |||||| || Sbjct 7252 ATTGCAGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGCAAAGAACTTTGAAA 7311 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 ||||||||||| || | ||||| Sbjct 7312 AGAGAGTTAAAGAGTGCTTGAAA 7334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079926812600