Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2122 313 4e-83 >seq2122 Length=9419 Score = 313 bits (346), Expect = 4e-83 Identities = 228/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5996 ACTCGTTGAGTGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5937 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||| | || | | | ||||||||||||||| ||| Sbjct 5936 CCTGTTATTGCCTCAAACTTCCACACGTTGAAGACGTGTTGTCCCTCTAAGAAGCG-GCC 5878 Query 122 ACCAACCATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||||| | ||| | | | | |||||||||||| ||||||||||||||||| |||||| Sbjct 5877 GCCAACGA-AGT-GTTCGCGTCACTATTTAGCAGGCTAAGGTCTCGTTCGTTAACGGAAT 5820 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 5819 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATCGAATCAA 5760 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 5759 GAAAGAGCTCTCAATCTGTC 5740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796773662772