Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq3345 210 4e-52 >seq3345 Length=67807 Score = 210 bits (232), Expect = 4e-52 Identities = 202/258 (78%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 82 TTCTAACCGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGG 141 |||||||| | ||| || ||| | | |||||||| |||| || ||||||||||||| Sbjct 65155 TTCTAACCCTATACCGT-TATCCGGTTAGGGGACAGTTTCAGGTGGTCAGTTTGACTGGG 65097 Query 142 GCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAAC 201 |||||||||||| ||| |||||||||||| ||||| | |||||| ||| ||||| Sbjct 65096 GCGGTCGCCTCCTAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCAGGCTGGTCGGAAAT 65037 Query 202 CATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGG 261 || || | |||| ||||||| |||| | |||| || || ||| |||||| | || | Sbjct 65036 CAGTCGTAGAGTGTAAAGGCATAAGGAAGCTTGATTGTGAGACCTACAAGTCGAACAAAG 64977 Query 262 ACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATA 321 ||||||||||| |||| ||||||| |||| | || ||||| ||||||||||| ||||||| Sbjct 64976 ACGAAAGTCGGCCTTAGTGATCCGACGGTTCCGAGTGGAAGGGCCGTCGCTCAACGGATA 64917 Query 322 AAAGCTACCCTGGGGATA 339 |||| ||| || |||||| Sbjct 64916 AAAGTTACTCTAGGGATA 64899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982366480512