Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3345 235 2e-59 >seq3345 Length=67807 Score = 235 bits (260), Expect = 2e-59 Identities = 342/478 (72%), Gaps = 19/478 (4%) Strand=Plus/Plus Query 105 CAGT-GCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163 |||| ||| |||| | ||||||||| |||||| ||| || |||||||||||||| Sbjct 66435 CAGTAGCTTTACCCCTAAGAAGAAACATTAACCGCTGCGCCTCAACGCATTTCGGGGAGA 66494 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 ||||||| | | || |||||| ||||||||||| ||||| |||||| || | || Sbjct 66495 TCCAGCTAGCTCCTGATTCGATTGGAATTTCACCCCTAACCACAACTCATCCGCTGATTT 66554 Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283 |||||| | ||| |||| | ||||||| || ||||| |||||| ||| |||||| Sbjct 66555 TTCAACATCAGTCGGTTGGTACCTCCACTTAGTGTTACCTAAGCTTCACACTGGCCATGG 66614 Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343 ||||||| | ||||||||| | | ||| | | ||||| || | ||||||| Sbjct 66615 TTAGATCATCAGGGTTCGGGTCTATAAATTATGACT-AAAAGCCCTTATCAGGCTCGCTT 66673 Query 344 TCGCTACGGCTACCCCA----CACGGGTTAACCTCGCGACACAACGCA-AACTCGCAGGC 398 || ||| |||| | || | | ||||||| || |||||| | || |||| || Sbjct 66674 TCACTATGGCTCCGACATTCTCTTGTCTTAACCTTGC--CACAACCTACAAGTCGCCAGC 66731 Query 399 TCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGAT 458 ||||||||||| ||||||| |||| | | ||| | || || |||| | | Sbjct 66732 TCATTCTTCAACAGGCACGACGTC------GAGCGTTAAGTCGCT----CTTCGACTGCT 66781 Query 459 TGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCC 518 |||| | | | ||||| || |||||||||||||| || ||||| |||||||||||||| Sbjct 66782 TGTAAACTTACGATTTCATGTTCTATTTCACTCCCCTCCCGGGGTTCTTTTCACCTTTCC 66841 Query 519 CTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 ||| ||||||| || | |||||||| | || | ||||||| |||| |||||||| Sbjct 66842 CTCGCGGTACTGGTTCACTATCGGTTATTCAGTAATATTTAGTCTTACGAGGTGGTCC 66899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817537983488