Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq2756 194 3e-47 >seq2756 Length=33385 Score = 194 bits (214), Expect = 3e-47 Identities = 227/301 (75%), Gaps = 17/301 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || || ||||||||||||||| |||||||| Sbjct 31681 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGGAGGAGTCT 31622 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | || |||||| || ||||| |||||| | Sbjct 31621 GGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTTCTCTCAAACCAGCTACTGATCGTGGC 31562 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||||| || |||| ||||||||| | |||||| | || |||| |||| || || Sbjct 31561 CTTGGTGAGCCATTACCTCACCAACAAGCTAATCAGGCGTGAGCTCATCCTTAGGC---- 31506 Query 187 AATCTTTGGTCAAAGAATGATGCCATC-CTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 | ||| ||| || |||| ||| |||| |||| | ||||| |||||| Sbjct 31505 -AGCTT------AAG--CTATTTCATCTCTC-GACA-TATGAAGATTTAGCAACCGTTTC 31457 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305 || ||||||| ||| || ||||| || ||||||| |||||||||||| |||||||| Sbjct 31456 CAGCAGTTATTCTTCTCCTAAGGGCAGATT-CTCACGTATTACTCACCCGTTCGCCACTA 31398 Query 306 A 306 | Sbjct 31397 A 31397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998365934592