Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3345 194 4e-47 >seq3345 Length=67807 Score = 194 bits (214), Expect = 4e-47 Identities = 292/406 (72%), Gaps = 18/406 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || |||| |||||||||| ||||||||| || ||| | | | | Sbjct 65938 CGACTACGCTTTTCAGCCTTACCTTAGGACCTGACTCACCCTCCGCGGACGAGCCTTCCG 65997 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | ||||||||| || Sbjct 65998 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGCTACTCAAGCTA 66057 Query 120 GCATTCTCACTCGCATCAACTCCA-CCACACAGTCACCCGGCA--GCTTCA--CCACTGA 174 |||||||||| || ||| | |||| | | ||| | |||||| | | || Sbjct 66058 ACATTCTCACT----TCTACTTCGTCCACGCCCACTTCCGTTAACGCTTCAATCTAATGT 66113 Query 175 CACGACGCTCCCCTACCCAACCAC--ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 | ||||||||||||| | ||| || ||||||||||| || |||| | Sbjct 66114 -AGAACGCTCCCCTACCGATGTTTTGACATCTT---ACAGCTTCGGCAAATTGCTTAGTC 66169 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 || | |||| ||||||| | |||||| || ||||||||||||||||||||||| |||| Sbjct 66170 CCAGT--CATTTTCGGCGCAGGATCACTCGAACAGTGAGCTATTACGCACTCTTTAAAGG 66227 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 || |||||||| || ||||||||| |||||| |||| |||| |||||| ||||| | Sbjct 66228 ATTGCTGCTTCTGGGCAAACCTCCTGATTGTCTCTGCAATCCCACCTCCTTTACCACTTA 66287 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | ||||||||||||||| | ||||||||||||||||||| Sbjct 66288 GCAATTATTTAGGGGCCTTAGCTAGTAATCTGGGCTGTTTCCCTCT 66333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177559820288