Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq2756 188 1e-45 >seq2756 Length=33385 Score = 188 bits (208), Expect = 1e-45 Identities = 215/286 (75%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 |||||||| || || |||||| | |||||| | ||| |||||||| ||||||| | Sbjct 32033 GCTTTCGCCTCTGAGTGTCAGTAATGGTCCAGTAGAGCGCTTTCGCCACCGGTGTTCTTT 31974 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||||||||||||||||||||||| | |||||| | || || | |||| || Sbjct 31973 CTAATATCTACGCATTTCACCGCTACACTAGAAATTCCCTCTACCCCTGCCATACTCTAG 31914 Query 126 AAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 | |||||| | ||| ||| ||||| ||||| | ||| ||| | ||||| Sbjct 31913 TCTACTAGTTTCCATTGCTTTTCTA-GGGTTAAGCCCTAGGCTTTAACAACGGACTTAAT 31855 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 | |||||| || |||||| |||||| | |||||||||||||||| || |||||| Sbjct 31854 AAACAACCTACAGGCGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCCCCGTATT 31795 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||| ||||||||| |||||||||||| ||| Sbjct 31794 ACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTCAAGTA 31749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828772605052