Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2122 98.7 1e-18 >seq2122 Length=9419 Score = 98.7 bits (108), Expect = 1e-18 Identities = 128/172 (74%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTC--GAATACATTACCAT 69 |||||||||||||||| |||| ||| |||||||| | |||| | || |||| ||| Sbjct 5250 TTTACTTTGAAAAAATCAGAGTGTTTCAAGCAGGCAGCTCGCTCTTGCATGGATTAGCAT 5309 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || ||||| |||||||| | ||| ||||||||| |||||| | |||| ||||||| Sbjct 5310 GGGATAATGAAATAGGAC-TTTGGTGCTATTTTGTTGGTTTCGAACACCG-AAGTAATGA 5367 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 | |||| ||| |||| |||| |||||| | | |||||||||||| Sbjct 5368 TTAATAGGGACAGTCAGGGGCACTCGTATTCCGCCGAGAGAGGTGAAATTCT 5419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511983076480