Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3345 271 1e-70 >seq3345 Length=67807 Score = 271 bits (300), Expect = 1e-70 Identities = 226/275 (82%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| ||||||||| |||||| |||||| | ||| || | ||| ||||| Sbjct 64574 GAGGTAGGCTTCCCACTTAGATGCTTTCAGCGGTTATCCTTACCATACATGGCTACCCAG 64633 Query 62 C-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | | |||||| | ||||||| |||||||||| |||| | |||||||||||||| Sbjct 64634 CGTTTACTGTTGGCACAATAACTGGTACACCAGAGGTATGTCTCTTCCGGTCCTCTCGTA 64693 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||||| | || |||| ||| || ||||| || |||||| ||||||||||||||| Sbjct 64694 CTAAGAAGAGAGCCTCGCAATACTCTAACGCCTACACCGGATATGGACCGAACTGTCTCA 64753 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| Sbjct 64754 CGACGTTCTGAACCCAGCTCACGTGCCGCTTTCATGGGCGAACAGCCCAACCCTTGGGAC 64813 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| | ||||||||||| ||||||||||||||| Sbjct 64814 GTACTACCGCCCCAGGATGCGACGAGCCGACATCG 64848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780774191632