Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2756 239 1e-60 >seq2756 Length=33385 Score = 239 bits (264), Expect = 1e-60 Identities = 300/410 (73%), Gaps = 29/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||| || || ||||| || ||||||| || ||| | |||||||| |||||||| Sbjct 31718 TTTACAGACCAAAATCCTTCATCCCTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 31659 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||| ||||||||||||||| |||||||||| |||||||||||| ||||||| Sbjct 31658 GCGGAAAATTCCTCACTGCTGCCTCCCGGAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 31599 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 |||||||| | |||||| |||||||| |||||| |||| |||| ||||||||| | ||| Sbjct 31598 GGCTGGTCGTTCTCTCAAACCAGCTACTGATCGTGGCCTTGGTGAGCCATTACCTCACCA 31539 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 || |||||||| || | |||||| ||| || | ||| || ||| Sbjct 31538 ACAAGCTAATCAGGCGTGAGCTCATCC-TTAGGCAG----CTTAAG------CTATTTCA 31490 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 ||| |||| |||| | ||||| ||||||||||| ||||| | |||| |||| Sbjct 31489 TCTCTCGAC-ATATGAAGATTTAGCAACCGTTTCCAGCAGTTATTCTTCTCCTAAGGGCA 31431 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| || ||||||||||||| ||||||| ||| || || || Sbjct 31430 GATTCTCACGTATTACTCACCCGTTCGCCACT-------AAAGTTAAAAACT--TT---- 31384 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||| || | ||||||||||||| ||||| Sbjct 31383 ----CGTTCGACTTGCATGTGTTAAGCATACCGCCAGCGTTCATCCTGAG 31338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222358291712