Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2756 316 5e-84 >seq2756 Length=33385 Score = 316 bits (350), Expect = 5e-84 Identities = 317/408 (78%), Gaps = 5/408 (1%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 |||||||||| |||| ||||||||| |||||||||||||||||||||||| || || Sbjct 31749 TACTTGAGGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATGC 31808 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||||| | ||||||||||| | |||||| |||| ||||||| | || Sbjct 31809 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGCCTGTAGGTTGTTTATTAAGTCCGTTGT 31868 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| ||| |||| ||||| | | || | |||||| | ||||||| | ||| Sbjct 31869 TAAAGCCTAGGGCTTAACCCTAGAAAAGCAATGGAAACTAGTAGACTAGAGTATGGCAGG 31928 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | |||||| ||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct 31929 GGTAGAGGGAATTTCTAGTGTAGCGGTGAAATGCGTAGATATTAGAAAGAACACCGGTGG 31988 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||| ||| | |||||| | ||||||||| || ||||||| ||| |||||| | Sbjct 31989 CGAAAGCGCTCTACTGGACCATTACTGACACTCAGAGGCGAAAGCTAGGGTAGCAAAAGG 32048 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 |||||||||||| ||||||| ||||||||||||| ||||||| ||| | |||| | Sbjct 32049 GATTAGATACCCCTGTAGTCCTAGCCGTAAACGATGGATACTAGATGT---TGTGCATTA 32105 Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | | || || ||| ||||| ||||||| || ||||||||||| Sbjct 32106 -TG-TACAGTATCGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 32151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203158946816