Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2122 302 9e-80 >seq2122 Length=9419 Score = 302 bits (334), Expect = 9e-80 Identities = 260/314 (83%), Gaps = 11/314 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGCCGGCTTCTT 77 || |||||||||| |||||||||||| | || | ||| | || || | ||||||| Sbjct 5831 GAACGAGACCTTAGCCTGCTAAATAGTGACGCGAACACTTCGTTGG--CGGCCGCTTCTT 5888 Query 78 AGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||| | || || | | ||||||||||||||||||||||||||||||||||| Sbjct 5889 AGAGGGACAACACGTCTTCAACGTGTGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 5948 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||||||||||||||||||||||||||||| | |||||||| | ||||||| Sbjct 5949 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCACTCAACGAGT-CTCCACCTTGA 6007 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAGCATTGCAAT 254 ||| |||||| ||| |||||| |||||| || ||||| |||||||||| |||||||| Sbjct 6008 CCGAAAGGTCCGGGAAATCTT--TAAACT-TGCATCGTGATGGGGATAGATTATTGCAAT 6064 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 |||| ||||||||||||||| ||||||| |||| |||||||||| |||| |||||||| Sbjct 6065 TATTAATCTTCAACGAGGAATACCTAGTAGGCGCATGTCATCAGCGTGCGTCGATTACGT 6124 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 6125 CCCTGCCCTTTGTA 6138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947167681536