Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3345 84.2 4e-14 seq2756 80.6 5e-13 >seq3345 Length=67807 Score = 84.2 bits (92), Expect = 4e-14 Identities = 165/240 (69%), Gaps = 8/240 (3%) Strand=Plus/Minus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||| |||||| | | | | |||||||||| ||| | | ||||| | | |||||| Sbjct 67301 GGATACCTTGGTGTTCAGAAGCGATGAAGGGCGTGGCTACCGACGATACGTTTCGGGGAA 67242 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCAT 132 | || || ||||||||| | || |||||| |||||| | | | | | Sbjct 67241 CTGG-AAGCAAGTTTTGATCCGAAAATACCCGAATAAGGAAACTT----CAATAGAACTT 67187 Query 133 TGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGC 191 | | |||||||||| | | || ||||||| | ||| |||||||||| |||| | Sbjct 67186 --CCTCTTGAATACATAAAGAGGAAAGAGCGAACCTAGTGAATTGAAACATCTTAGTAAC 67129 Query 192 TGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 | ||||||||||| ||| | ||||| | ||||| ||||||||||| ||||| || || Sbjct 67128 TAGAGGAAAAGAAAGCAAAAGCGATTCTCTTAGTAGCGGCGAGCGAAAAGGGATTAGTCT 67069 >seq2756 Length=33385 Score = 80.6 bits (88), Expect = 5e-13 Identities = 164/240 (68%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||| |||||| | | | | |||||||||| ||| | | ||||| | | |||||| Sbjct 33048 GGATACCTTGGTGTTCAGAAGCGATGAAGGGCGTGGCTACCGACGATACGTTTCGGGGAA 33107 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCAT 132 | || || ||||||||| | || |||||| |||||| | | | | | Sbjct 33108 CTGG-AAGCAAGTTTTGATCCGAAAATACCCGAATAAGGAAACTT----CAATAGAACTT 33162 Query 133 TGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGC 191 | | |||||||||| | | || ||| ||| | ||| |||||||||| |||| | Sbjct 33163 --CCTCTTGAATACATAAAGAGGAAAGAGCAAACCTAGTGAATTGAAACATCTTAGTAAC 33220 Query 192 TGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 | ||||||||||| ||| | ||||| | ||||| ||||||||||| ||||| || || Sbjct 33221 TAGAGGAAAAGAAAGCAAAAGCGATTCTCTTAGTAGCGGCGAGCGAAAAGGGATTAGTCT 33280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918368664192