Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2122 461 2e-127 >seq2122 Length=9419 Score = 461 bits (510), Expect = 2e-127 Identities = 300/326 (92%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 208 GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 |||||||||||||| | ||| | || |||||||||||||||||||||||||||| | Sbjct 9319 GTAGTGGTATTTCATTGGCG--GTCACC-CTCCCACTTATTCTACACCTCTCAAGTCGTC 9263 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 | | | | |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 9262 CCGCGCAA-CAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAA 9204 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 9203 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCACGA 9144 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 9143 ATCCATTCATGCGCGTCACTAATTGGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 9084 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9083 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 9024 Query 508 TGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| || Sbjct 9023 TGGGCAGAAATCACATTGCGTCAGCA 8998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635144206976