Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3345 282 1e-73 >seq3345 Length=67807 Score = 282 bits (312), Expect = 1e-73 Identities = 359/484 (74%), Gaps = 10/484 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| || ||||||| |||| ||| |||||||| | |||||| || Sbjct 64983 TCGACTTGTAGGTCTCACAATCAAGCTTCCTTATGCCTTTACACTCTACGACTGATTTCC 65042 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| |||||| |||||||| |||||||||||| |||| ||| ||| |||||||||| Sbjct 65043 GACCAGCCTGAGGAAACCTTTGCACGCCTCCGTTACCTTTTAGGA-GGCGACCGCCCCAG 65101 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC-A 179 | ||||| ||||| | ||||||||| | || ||| | || | ||||||| |||| | Sbjct 65102 TCAAACTGACCACCTGAAACTGTCCCCTAACCGGATAACGGTATAGGGTTAGA-ATCCTA 65160 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTC-CACAACCACTAGCGTGGCCGCATCATA 238 | || |||||||||| ||| ||||| ||| | || || | | ||| Sbjct 65161 GCATTGTTAGAGTGGTATCTCACCAACGGCTCTAATCTCCCCTCAAGAAG-ATTTTCAAC 65219 Query 239 GTCTCCCACCTATCCTACACAAAC--CGCACCGAATGCCAATACCAAGCTATAGTGAAG- 295 | |||||||||||||| | ||||| || | || ||||||| ||||||| ||| ||| Sbjct 65220 GCCTCCCACCTATCCTGCGCAAACAAAGCCCGGA--GCCAATATCAAGCTACAGTAAAGC 65277 Query 296 GTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTC 355 || ||||||||| |||| | || | | ||||||| || | | ||||| Sbjct 65278 TTCATAGGGTCTTTTTGTCCGGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATTTC 65337 Query 356 ACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTT 415 ||| | || | ||||||| | | ||||||| || ||||||| ||||||||||| Sbjct 65338 GCCGAGTCTCTCTCCGAGACAGTACGCAGATCGTTACACCTTTCGTGCGGGTCGGAACTT 65397 Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGG 475 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||| Sbjct 65398 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGG 65457 Query 476 CTTC 479 |||| Sbjct 65458 CTTC 65461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702341914112