Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2756 145 2e-32 >seq2756 Length=33385 Score = 145 bits (160), Expect = 2e-32 Identities = 199/279 (71%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||||||| | | |||| || Sbjct 31789 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTCAAGTACCGTCA------------- 31743 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 ||| || || | | | |||||| ||||||| || | | ||||||||| |||||| Sbjct 31742 -GAAC---TTCTTTCTTGAGAAAAGAGGTTTACAGACCAAA-ATCCTTCATCCCTCACGC 31688 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | ||| |||| || ||| |||||| || ||||||||||||||||||||| || Sbjct 31687 GGTATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGGAG 31628 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | | | |||||| | | ||| || Sbjct 31627 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTTCTCTCAAACCAGCTACTGAT 31568 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | || |||| ||| ||||| | || || | ||||| Sbjct 31567 CGTGGCCTTGGTGAGCCATTACCTCACCAACAAGCTAAT 31529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068763532544