Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2122 614 2e-173 >seq2122 Length=9419 Score = 614 bits (680), Expect = 2e-173 Identities = 442/505 (88%), Gaps = 5/505 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | |||||||||| ||||| |||||||||||| Sbjct 5025 GTACTCATTCCAATTACAAGACTAGATGTAGCCCTGTATTGTTATTTCTTGTCACTACCT 4966 Query 61 CCCCGTGTCGGGATT-GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| ||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 4965 CCCTGTGTCAGGATTCGGGCAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 4906 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct 4905 CTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTAAACGCCATGGT 4846 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4845 AGGCCTCGATCCTACCATCGAAAGCTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 4786 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 | ||||||||||||| ||||||| ||| || || | | ||| || || | || Sbjct 4785 GTGAAGCCATGCGATTCGAGCAGTTATTGTGACTCGGCACGCAACCC--AAAGGGGAAGG 4728 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||| |||||||||||||||| |||||| ||||||| || |||||||||||||||| Sbjct 4727 TTTCTTATCTAATAAATACAACCCTTCGTGAGTCGGGTCTTCCTGCATGTATTAGCTCTA 4668 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||| ||||||||||| ||||| |||||| ||||||||||| ||||||||||||||| Sbjct 4667 GAATTACTACGGTTATCCAAGTAGT-AGGTACCATCAAATAAACCATAACTGATTTAATG 4609 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||| Sbjct 4608 AGCCATTCGCAGTTTCACAGTATAG-TCGCTTATACTTAGACATGCATGGCTTAATCTTT 4550 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4549 GAGACAAGCATATGACTACTGGCAG 4525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510348465152