Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq41 277 3e-72 seq5 98.7 1e-18 seq17 91.5 2e-16 >seq41 Length=3555 Score = 277 bits (306), Expect = 3e-72 Identities = 202/229 (88%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||| | Sbjct 1042 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGAATT-C 1099 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||| |||||| || ||||||| |||| Sbjct 1100 CTCGTTGAAGATGAATAATTGCAATCATCTATCCCCAGCACGATAAAGTTTCAAAAGATT 1159 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| |||| ||| | | ||||||||| | ||||||||||||||||||||| Sbjct 1160 ACCCGCGCCTTCCGGCGTAGGAAA-ATACTCGTTGACTTCATCAGTGTAGCGCGCGTGCG 1218 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1219 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1267 >seq5 Length=2516746 Score = 98.7 bits (108), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| ||||| |||||| || ||||||| || ||||||||||| ||| Sbjct 1101970 GTACAAAGGGCAGGAACGTAATCAACGTATGC-TGATGACATGCACTTACTAGGAA-TTC 1102027 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119 ||| ||||| | || |||| |||| || ||| |||| | | || || ||| ||||| || Sbjct 1102028 CTCATTGAAAATGAATAATTACAATCATGTATTCCCAGCGCAATAAAGTTTCCAAAGGTT 1102087 Query 120 ACCCGGACCTGTCGG 134 |||| ||| |||| Sbjct 1102088 GCCCGCGCCTTTCGG 1102102 Score = 91.5 bits (100), Expect = 2e-16 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 ||||||| | |||||||||||||| |||||| ||||| |||| |||||||||| |||| Sbjct 1049306 TCGTTGACTTCATCAGTGTAGCGCACGTGCGACCCAGGACAT-TAAGGGCATCGAAGACT 1049248 Query 209 TGTTATTGCCTCAAACTTCC 228 || |||||| |||||||||| Sbjct 1049247 TGCTATTGCTTCAAACTTCC 1049228 >seq17 Length=1200735 Score = 91.5 bits (100), Expect = 2e-16 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| ||| | ||||||| | ||||||| |||| | ||||||| ||| Sbjct 103746 GTACAAAGGGCAAAGACTTGATCAACGC-ATACTGATGACATGCGCCTTCTAGGAA-TTC 103803 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGATT 119 || || ||||| || |||||||| || || ||| || ||| | |||| ||||||| Sbjct 103804 CTTGTGGAAGATGAATGATTGCAATCGTCCATTTCCAGCATGATAATGTTTCAAAAGATT 103863 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||| ||| | || ||| | | |||||| || | ||| ||||| ||||||||| Sbjct 103864 GCCCGCGCCTTCCAGCATAGG-AAAATACTCGTAGATTTCATTAGTGTTGCGCGCGTG 103920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999417200