Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq42 291 3e-76 seq25 172 2e-40 seq8 172 2e-40 seq2 149 3e-33 seq11 116 2e-23 seq10 84.2 9e-14 >seq42 Length=3433 Score = 291 bits (322), Expect = 3e-76 Identities = 256/320 (80%), Gaps = 18/320 (6%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| ||| | ||||| || | ||||||||| |||||||||||||||||||||| Sbjct 2628 AGGATGTTGGTGAAATGGCCTTATCTGTCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 2687 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG--------- 490 || ||||||||| |||||||| |||||||| ||| |||||||||||| | Sbjct 2688 ATATATGCGAGTCTTTGGGTGACAAACCCGCAGGCGCAATGAAAGTGAAGGCTAACATGG 2747 Query 491 ------GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCG-GATG 543 |||||| || || | |||||| |||||||||||| ||| ||| || Sbjct 2748 TTAGCTGAGGTGAGATCCGC--AAGGTGCATCATCGACCGATCTGAATGGTTTCCTGAAA 2805 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 2806 GATTTGAGTAAGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 2865 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||| | || |||| || | |||| ||||| |||| ||||| ||||||||||||||||| Sbjct 2866 TGAAGTCTGAAGAAATTCAGATGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 2925 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 2926 AAATTTGGGTATAGGGGCGA 2945 Score = 196 bits (216), Expect = 2e-47 Identities = 141/163 (87%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||| |||||||||||||||||| ||||||| |||||||||| ||||||| Sbjct 2109 TTCGAAGAGTCAGGTTGTTTGGGAATGCAGCCTAAAATGGGTGGTAAATTTCATCTAAAG 2168 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||| | ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 2169 CTAAATATTGCCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 2228 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||| ||||||||||||| || |||||||| |||| |||||||| Sbjct 2229 TTGAAAAGAGAGTTAAATAGTACGTGAAACTGTTAAAAGGGAA 2271 >seq25 Length=460934 Score = 172 bits (190), Expect = 2e-40 Identities = 110/120 (92%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||||||||||||||||||||||||||||||||||||||||||| | || |||| || | Sbjct 379957 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCTGAAGAAATTCAG 380016 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 380017 ATGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 380076 >seq8 Length=1795272 Score = 172 bits (190), Expect = 2e-40 Identities = 110/120 (92%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||||||||||||||||||||||||||||||||||||||||||| | || |||| || | Sbjct 1414353 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCTGAAGAAATTCAG 1414294 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1414293 ATGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1414234 >seq2 Length=3757272 Score = 149 bits (164), Expect = 3e-33 Identities = 139/174 (80%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 511 TGCACCATCGACCGATCCTGATGTCTTCG-GATGGATTTGAGTAAGAGCATAGCTGTTGG 569 |||| ||| |||||||| ||| ||| || ||||||||||||||| || |||||| Sbjct 980833 TGCATCATTGACCGATCTGAATGGTTTCCTGAAAGATTTGAGTAAGAGCGCAGGTGTTGG 980892 Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||| |||||||||| ||||||| ||||| |||| | || |||| || | |||| Sbjct 980893 GACCCGAC-GATGGTGAACAATGCCTGCATAGGACGAAGTCTGAAGAAATTCAGATGGAA 980951 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||| ||| | | ||||||||||| |||||||| |||||||||||||| Sbjct 980952 CCTCGTAGCGATTCGGACATGCAAATCGATTGTCAAATTCGGGTATAGGGGCGA 981005 >seq11 Length=1477538 Score = 116 bits (128), Expect = 2e-23 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 546 TTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 |||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||| Sbjct 1190075 TTTGAGTAAGAGCACATATGTTGGGACGCGAAAGATGGTGAATTATGCCTGAATAGGGTG 1190134 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA 654 ||| | || |||| || |||| ||||| |||| ||||| |||||| Sbjct 1190135 AAGTCTGAAGAAATTCAAATGGAAGCTCGTAGCGATTCTGAAATGCAAA 1190183 >seq10 Length=1578466 Score = 84.2 bits (92), Expect = 9e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 62968 GCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 62915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998284000