Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq41 333 5e-89 seq5 113 9e-23 seq17 105 1e-20 seq1 86.0 1e-14 seq3 73.4 7e-11 >seq41 Length=3555 Score = 333 bits (368), Expect = 5e-89 Identities = 264/314 (84%), Gaps = 11/314 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGC-----CCGCTTTGGCGGGTCGCCGGCTT 74 || |||||||||||||| |||||||| | | ||| ||| ||| | ||| Sbjct 1350 GAACGAGACCTTAACCTACTAAATAGTTACGTAAATTCCGATTTA-CGG----CAAACTT 1296 Query 75 CTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1295 CTTAGAGGGACTATCGGTCTAAACCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 1236 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 |||||||||||||||||||||||||||||||||||| || |||||||| | ||| Sbjct 1235 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAACGAGTATTTT-CCTA 1177 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||||||| |||||||||| | ||||| | |||||||||||||||| |||||||| Sbjct 1176 CGCCGGAAGGCGCGGGTAATCTTTTGAAACTTTATCGTGCTGGGGATAGATGATTGCAAT 1117 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 |||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||| Sbjct 1116 TATTCATCTTCAACGAGGAATTCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGT 1057 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 1056 CCCTGCCCTTTGTA 1043 >seq5 Length=2516746 Score = 113 bits (124), Expect = 9e-23 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||| ||| || ||| ||||| | | | |||||| ||| | |||| ||||| Sbjct 1102102 CCGAAAGGCGCGGGCAACCTTTGGAAACTTTATTGCGCTGGGAATACATGATTGTAATTA 1102043 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || | ||||| ||||||| ||||||||| || ||||||||||| |||||||||||| | Sbjct 1102042 TTCATTTTCAATGAGGAATTCCTAGTAAGTGCATGTCATCAGCATACGTTGATTACGTTC 1101983 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 1101982 CTGCCCTTTGTA 1101971 Score = 91.5 bits (100), Expect = 3e-16 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 98 CCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACG 157 ||||||||||||||| |||||| || |||| |||||||||| |||| ||||| |||||| Sbjct 1049223 CCGATGGAAGTTTGAAGCAATAGCAAGTCTTCGATGCCCTTA-ATGTCCTGGGTCGCACG 1049281 Query 158 CGCGCTACACTGACAGAGCCAACGA 182 |||||||||||| || |||||| Sbjct 1049282 TGCGCTACACTGATGAAGTCAACGA 1049306 >seq17 Length=1200735 Score = 105 bits (116), Expect = 1e-20 Identities = 129/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 154 CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213 ||||||||| ||||| | | | |||||| | ||| || |||||| ||| || Sbjct 103920 CACGCGCGCAACACTAATGAAATCTACGAGTATTTT-CCTATGCTGGAAGGCGCGGGCAA 103862 Query 214 TCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273 |||| | |||| | || |||||| || || |||||||| ||| ||||| || |||| Sbjct 103861 TCTTTTGAAACATTATCATGCTGGAAATGGACGATTGCAATCATTCATCTTCCACAAGGA 103802 Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| | |||| ||||||||| | |||||||| | ||| ||||||||||| Sbjct 103801 ATTCCTAGAAGGCGCATGTCATCAGTATGCGTTGATCAAGTCTTTGCCCTTTGTA 103747 >seq1 Length=4169073 Score = 86.0 bits (94), Expect = 1e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 1655477 CTTCTTAGAGGGACTATCGGTCTAAACCGATGGAAGTTTGAGGCAATAACAGGTCTG 1655533 >seq3 Length=3052702 Score = 73.4 bits (80), Expect = 7e-11 Identities = 65/80 (81%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||||||| || ||||||| | ||||| | || ||||||| |||| ||||||||| Sbjct 2441707 GCCGGAAGGCGCGGTTAATCTTTTGAAACTATATCATGCTGGG-ATAGTTGATTGCAATT 2441649 Query 256 ATTGCTCTTCAACGAGGAAT 275 ||| ||||||||||||||| Sbjct 2441648 ATTCATCTTCAACGAGGAAT 2441629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199242240