Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq6075 205 2e-50 >seq6075 Length=994 Score = 205 bits (226), Expect = 2e-50 Identities = 250/333 (75%), Gaps = 20/333 (6%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTC-- 69 |||| |||||||||| |||||| || || ||||| | |||||||| ||||| Sbjct 350 GGGGAGTGAAATAGAACCTGAAACCATTAGCTTACAATCATTCGGAGCCCTATGATTTAT 291 Query 70 ---GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTT 126 |||||||| ||||||||||||||||||||| |||||| || || | || ||||| Sbjct 290 CAGGGTGACGGACTGCCTTTTGCATAATGAGCCTGCGAGTT-GTGGTGTCTGGCAAGGTT 232 Query 127 AAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGT- 185 ||| ||| | || ||||| || ||||||||| ||||| ||||||| || || Sbjct 231 AAG----TCAAGTACGA-AGCCGTAGCGAAAGCGAGTCTTAATAGGGCGAA---TTAGTC 180 Query 186 -GGCGCT--AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAAC- 241 | |||| |||| |||||| |||||||| ||| ||||||||||||| | |||| Sbjct 179 AGACGCTGCAGACCCGAAACGAAGTGATCTATCCATGAGCAGGTTGAAGCTGGTGTAAGA 120 Query 242 GCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGG 301 || | ||||||||||||||| | ||||||||||| ||||||||| | || ||||| Sbjct 119 GCCAG-TGGAGGACCGAACCGATGGGCGTTGAAAAGTCCCCGGATGACTTGTGGATAGGG 61 Query 302 GTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||| | |||||| || Sbjct 60 GTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972685919744