Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10892 212 1e-52 seq6212 89.7 9e-16 >seq10892 Length=581 Score = 212 bits (234), Expect = 1e-52 Identities = 198/249 (80%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG----CTCGAATACATTAGCA 129 ||||||||||| ||||||||||| ||||||||||| || || |||||| |||||| Sbjct 269 TTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCAATTTTCGCCTTGAATACTTTAGCA 210 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||| |||||||| | | || |||||||||||||| ||||||| ||||||| Sbjct 209 TGGAATAATAAAATAGGACTT-CAGTCTTATTTTGTTGGTTTTCAGGACCGAAGTAATGA 151 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 ||||||| | || | | | | ||||| ||||||||||||||||||||||||| | Sbjct 150 TTAATAGAAAACATCAGAGCCATTACTATTCCGTTGTCAGAGGTGAAATTCTTGGATTGA 91 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| | |||||||||||||| || | || ||||||||||||| ||||||| Sbjct 90 CGGAAGAGTCACTACTGCGAAAGCATTTGGCGGGGGGTTTTTCATTAATCA-AGAACGAA 32 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 31 AGTTAGGGG 23 >seq6212 Length=42043 Score = 89.7 bits (98), Expect = 9e-16 Identities = 78/96 (81%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 |||| |||||||||||||||||||| | ||||| | | |||||||||||| || | Sbjct 24731 TTGTTAGAGGTGAAATTCTTGGATTGACGGAAGAGTCATTACTGCGAAAGCATTTGGCGG 24790 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||||| |||||||||||||||| Sbjct 24791 GGGATTTTTCATTAATCA-AGAACGAAAGTTAGGGG 24825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915092674496