Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2859 140 3e-31 seq24 118 1e-24 >seq2859 Length=1125 Score = 140 bits (154), Expect = 3e-31 Identities = 86/92 (93%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct 994 CGACTGTTTACCAAAAACACAGCACTCTGCTAACACGTAAGTGGATGTATAGGGTGTGAC 1053 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATGCT 160 ||||||||||||| |||||||||||||||||| Sbjct 1054 GCCTGCCCGGTGCTGGAAGGTTAATTGATGCT 1085 >seq24 Length=1136 Score = 118 bits (130), Expect = 1e-24 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 996 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 1055 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||| ||||| Sbjct 1056 GCCTGCCCGGTGCTCGAAGGTTAACTGATG 1085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476745832987