Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2859 192 1e-46 seq24 179 9e-43 seq663 98.7 3e-18 >seq2859 Length=1125 Score = 192 bits (212), Expect = 1e-46 Identities = 214/282 (76%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 147 GTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGG 206 |||||| |||||||||||||| ||||||| ||||||| |||||||||||||||| | Sbjct 1125 GTTTACTGGGGCTTCGATCAACTGCTTCGCCGAAGCTAACAGCATCAATTAACCTTCCAG 1066 Query 207 CACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTT 266 |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| Sbjct 1065 CACCGGGCAGGCGTCACACCCTATACATCCACTTACGTGTTAGCAGAGTGCTGTGTTTTT 1006 Query 267 AATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG-GAGCAAGTC-C 324 |||||||||| || || | | || | | ||||| || ||| || || | Sbjct 1005 GGTAAACAGTCGGGAGGGACT-CTTTGTTGCAACCTTTCCAGCTTTCGAGAGTAAATCTC 947 Query 325 TTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCC 384 | ||| ||| |||||| | |||||| |||||||| |||||| |||||||| Sbjct 946 TATACCGAAGGAGGCACACCTTATACCGAAGATACGGTGCTATTTTGCAGAGTTCCTTAA 887 Query 385 CCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 || | |||| || ||||||| | || ||| | || |||| Sbjct 886 CCAGGATTCTTCCACGCGCCTTAGAATACTCATCTCACCCAC 845 >seq24 Length=1136 Score = 179 bits (198), Expect = 9e-43 Identities = 214/287 (75%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 138 ACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTA 197 ||||||||||||||| ||||||| ||||| ||||||| | ||| || ||||| ||| Sbjct 1136 ACGGCCGCCGTTTACTCGGGCTTCAATCAAATGCTTCGCTTGCGCTGACATCATCAGTTA 1077 Query 198 ACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGC 257 |||||| ||||||||||||||||||||| ||||| ||||||| |||||| ||| ||||| Sbjct 1076 ACCTTCGAGCACCGGGCAGGCGTCACACCTTATACATCCACTTACGTGTTAGCAAAGTGC 1017 Query 258 TGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG-GA 316 ||||||||| |||||||||| || || | | || | | | | |||| || || Sbjct 1016 TGTGTTTTTGGTAAACAGTCGGGAGGGACT-CTTTGTTGCAACCTCTTTCGCTTTCGAGA 958 Query 317 GCAAGTCCTTCACCCTCA--CCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 | || || | | | | ||| |||||||| |||||| |||||||| ||||| Sbjct 957 GTAAATCTCTAATACAAAAGTAGGCACACCTTCTACCGAAGATACGGTGCTAGTTTGCAG 898 Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCA 421 |||||||| || | ||||| || ||||||| | || ||| |||| Sbjct 897 AGTTCCTTAACCAGGGTTCTTCCACGCGCCTTAGAATACTCATCCCA 851 >seq663 Length=308 Score = 98.7 bits (108), Expect = 3e-18 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 || ||||| | | | ||||||||||| || | ||| |||||||| || ||||||| Sbjct 104 ATTTTCACCTCCACTACAATTTCACTGGATCCCTGGTTGAGACAGCTCCCATCTCGTTAC 45 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTA 118 ||||||| |||||||||| | ||| ||||||||||||||||||| Sbjct 44 GCCATTCATGCAGGTCGGTATTTAACCGACAAGGAATTTCGCTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260652145984